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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24509272_24510355_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24509272 - 24510355

Intron Length:

1084

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

GGTTCATTAAAT

Flanking Amino Acid:

LEHGLSRIWQDVQLKVKTYL

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

88.1

28.7

Major BPS

73.5

0.58

79.3

29.4

Major PPT

88.3

0.86

0.7

84.9

29.9

Minor 5ss

45.1

-0.5

3.1

44.3

Minor BPS

65.5

0.57

1.7

80.86

39.7

Associated Gene:

Gene:

VPS50

Ensembl Gene ID:

ENSAPLG00000009583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010103

24473835 - 24547308

73474

ENSAPLT00000024313

24472052 - 24547308

75257