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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24510451_24511123_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24510451 - 24511123

Intron Length:

673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATACTGA

5'SS Class:

major

3'SS Sequence:

TTTATTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TATTTCTAAACT

Flanking Amino Acid:

DFIFVLDVISRLMQVGEEFC

Intron Amino Acid Position:

423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

60.9

40.5

Major BPS

84.7

0.86

74.3

40.7

Major PPT

87.8

0.85

0.8

85.9

33.1

Minor 5ss

48.7

-0.1

2.6

64.8

46.5

Minor BPS

73.8

0.83

1.6

88.69

36.1

Associated Gene:

Gene:

VPS50

Ensembl Gene ID:

ENSAPLG00000009583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024313

24472052 - 24547308

75257

ENSAPLT00000010103

24473835 - 24547308

73474