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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24511223_24513667_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24511223 - 24513667

Intron Length:

2445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTGTTGTATTT

Flanking Amino Acid:

QSVNYFKTYHRTRLEELRMF

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

80.3

26.9

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

81.3

0.7

0.9

78.1

40.1

Minor 5ss

28.6

-2.5

3.4

37.8

Minor BPS

45.9

-0.2

2.2

70.13

42.3

Associated Gene:

Gene:

VPS50

Ensembl Gene ID:

ENSAPLG00000009583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024313

24472052 - 24547308

75257

ENSAPLT00000010103

24473835 - 24547308

73474