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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24513759_24514898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24513759 - 24514898

Intron Length:

1140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTACGTTCT

5'SS Class:

major

3'SS Sequence:

TTTCTATTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTTCTATTAATA

Flanking Amino Acid:

KSSFSILQLHEFKFMEQSRS

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

74.6

36.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

77.4

0.62

0.9

74.4

34.1

Minor 5ss

44.2

-0.6

3.1

63.5

41.1

Minor BPS

66.7

0.52

1.5

77.76

32.3

Associated Gene:

Gene:

VPS50

Ensembl Gene ID:

ENSAPLG00000009583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024313

24472052 - 24547308

75257

ENSAPLT00000010103

24473835 - 24547308

73474