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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24540039_24540194_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24540039 - 24540194

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TATTCGATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTACTGAATT

Flanking Amino Acid:

KPFLQQFYSQTVSTASELRK

Intron Amino Acid Position:

771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

84.6

33.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.4

0.64

0.9

74.5

39.7

Minor 5ss

34.8

-1.7

3.1

49.5

46.3

Minor BPS

67.8

0.64

1.6

84.76

35.2

Associated Gene:

Gene:

VPS50

Ensembl Gene ID:

ENSAPLG00000009583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024313

24472052 - 24547308

75257

ENSAPLT00000010103

24473835 - 24547308

73474