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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24820116_24824498_R

Intron Information:

Intron Rank:

152629

Intron Class:

major

Intron Phase:

Intron Coordinates:

24820116 - 24824498

Intron Length:

4383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTCTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029714

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033361

24820090 - 24825805

5716