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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2485036_2492252_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2485036 - 2492252

Intron Length:

7217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGGGTCCC

5'SS Class:

major

3'SS Sequence:

CTCTCTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAC

U12 Branch Point Sequence:

TGGTAACTGACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

57.1

42.2

Major BPS

64.8

0.37

0.9

55.1

32.8

Major PPT

84.2

0.77

0.7

76.5

32.2

Minor 5ss

29.1

-2.4

36.9

40.3

Minor BPS

42.8

-0.7

2.1

50.71

42.9

Associated Gene:

Gene:

ARF1

Ensembl Gene ID:

ENSAPLG00000022202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025290

2484878 - 2494908

10031