Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_24871947_24873174_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24871947 - 24873174

Intron Length:

1228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAATGGTT

5'SS Class:

major

3'SS Sequence:

CCCCCTTTTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

AAATACTTAATT

Flanking Amino Acid:

SCVDHCLPEKTGPLLCYSPK

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

72.5

36.9

Major BPS

88.7

0.96

0.8

36.5

Major PPT

68.3

0.41

33.5

Minor 5ss

36.9

-1.5

3.8

55.7

43.1

Minor BPS

68.7

0.66

1.4

78.05

37.6

Associated Gene:

Gene:

TFPI2

Ensembl Gene ID:

ENSAPLG00000017562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046042

24871729 - 24875386

3658

ENSAPLT00000018144

24871729 - 24874125

2397