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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2493168_2493813_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2493168 - 2493813

Intron Length:

646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

GTGTGCTTATTC

Flanking Amino Acid:

LWRHYFQNTQGLIFVVDSND

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

69.9

0.45

0.9

61.7

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

49.9

-0

62.62

43.4

Associated Gene:

Gene:

ARF1

Ensembl Gene ID:

ENSAPLG00000022202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025290

2484878 - 2494908

10031