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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24951494_24958457_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24951494 - 24958457

Intron Length:

6964

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTCGTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGCTAT

U12 Branch Point Sequence:

TGCTTCGTGAAG

Flanking Amino Acid:

QEERLWGVATVLTPLETIIQ

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

46.9

-0.2

1.3

42.2

40.1

Major PPT

66.1

0.36

1.1

67.8

Minor 5ss

-1.6

47.1

42.6

Minor BPS

44.8

-0.5

2.2

51.49

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010896

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011352

24877622 - 24966104

88483