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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2498808_2499029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2498808 - 2499029

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGGGCT

5'SS Class:

major

3'SS Sequence:

CCCGACCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTCACCCCGACC

Flanking Amino Acid:

QDKEEKAEEKRTESGKKAKK

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

66.9

38.5

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

61.8

0.27

0.9

53.6

30.6

Minor 5ss

26.9

-2.7

3.5

39.6

45.9

Minor BPS

48.1

-0.1

64.06

41.4

Associated Gene:

Gene:

C1orf35

Ensembl Gene ID:

ENSAPLG00000004460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026562

2497937 - 2500120

2184

ENSAPLT00000020472

2497937 - 2501244

3308

ENSAPLT00000004588

2496662 - 2500135

3474