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Intron Name: Anas_platyrhynchos_platyrhynchos_2_24997516_24999124_F

Intron Information:

Intron Rank:

146418

Intron Class:

major

Intron Phase:

Intron Coordinates:

24997516 - 24999124

Intron Length:

1609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTGCTTTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.7

44.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

72.1

0.5

1.1

71.5

38.1

Minor 5ss

36.4

-1.5

3.3

47.2

Minor BPS

67.8

0.42

1.6

72.3

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038415

24997087 - 25006376

9290