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Intron Name: Anas_platyrhynchos_platyrhynchos_2_25123810_25125373_R


Intron Information:

Intron Rank:
132890

Intron Class:
major-like

Intron Phase:

Intron Coordinates:
25123810 - 25125373

Intron Length:
1564

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATT|GTGAGTTAA

5'SS Class:
major

3'SS Sequence:
GACACTGATGAAG|T

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
ATTATAT

U12 Branch Point Sequence:
TGTTTTCTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1
71
29.7

Major BPS
70.4
0.51
1
67.1
39.4

Major PPT
48.8
-0
1.2
45.1
40.4

Minor 5ss
36.6
-1.5
2.9
45.9
43.7

Minor BPS
57.6
0.23
1.6
71.22
34.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25121588 - 25126053
4466