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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2514325_2514426_F

Intron Information:

Intron Rank:

123699

Intron Class:

major

Intron Phase:

Intron Coordinates:

2514325 - 2514426

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCAGGAT

U12 Branch Point Sequence:

TCTTCTTTTCCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

-0.3

1.4

40.7

Major PPT

88.4

0.86

0.6

88.2

21.6

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

45.6

-0.2

3.6

79.44

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033741

2512117 - 2515068

2952