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Intron Name: Anas_platyrhynchos_platyrhynchos_2_25161831_25163549_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25161831 - 25163549

Intron Length:

1719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTTGC

5'SS Class:

major

3'SS Sequence:

CTTCTTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

GTCTAATTATCT

Flanking Amino Acid:

AVTSCLATSQHVSEASAGRR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.3

73.2

39.3

Major BPS

76.9

0.67

66.3

40.4

Major PPT

86.1

0.81

0.7

24.2

Minor 5ss

41.9

-0.9

2.8

51.9

38.5

Minor BPS

0.01

71.15

Associated Gene:

Gene:

COL1A2

Ensembl Gene ID:

ENSAPLG00000011169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030919

25161234 - 25198254

37021

ENSAPLT00000024258

25161234 - 25198254

37021