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Intron Name: Anas_platyrhynchos_platyrhynchos_2_25164906_25166442_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25164906 - 25166442

Intron Length:

1537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCACGTTATAA

Flanking Amino Acid:

RGDKGPQGERGPPGPPGRDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

78.6

37.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.1

0.66

0.8

31.2

Minor 5ss

33.5

-1.9

3.2

40.3

45.6

Minor BPS

45.4

-0.3

2.3

61.15

44.7

Associated Gene:

Gene:

COL1A2

Ensembl Gene ID:

ENSAPLG00000011169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030919

25161234 - 25198254

37021

ENSAPLT00000024258

25161234 - 25198254

37021