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Intron Name: Anas_platyrhynchos_platyrhynchos_2_25166527_25167879_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25166527 - 25167879

Intron Length:

1353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGGCAT

5'SS Class:

major

3'SS Sequence:

TTGTCACCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CATGCTTTAATT

Flanking Amino Acid:

GPPGPPGLGGNFAAQYDPSK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

63.3

42.8

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

72.9

0.52

0.9

66.2

34.8

Minor 5ss

33.7

-1.9

3.4

44.5

Minor BPS

0.64

1.4

76.34

41.1

Associated Gene:

Gene:

COL1A2

Ensembl Gene ID:

ENSAPLG00000011169

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030919

25161234 - 25198254

37021

ENSAPLT00000024258

25161234 - 25198254

37021