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Intron Name: Anas_platyrhynchos_platyrhynchos_2_25253801_25254625_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25253801 - 25254625

Intron Length:

825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TCGGGGATTAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTCTTCTTCATT

Flanking Amino Acid:

QTQIPQQQSAGEFRMTTFQR

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.2

84.4

33.5

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

51.5

0.03

1.2

48.3

43.1

Minor 5ss

33.8

-1.8

2.6

44.2

Minor BPS

66.4

0.6

1.7

82.74

39.5

Associated Gene:

Gene:

SGCE

Ensembl Gene ID:

ENSAPLG00000014328

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033215

25251527 - 25279754

28228

ENSAPLT00000031788

25251527 - 25279754

28228

ENSAPLT00000014974

25251527 - 25279754

28228