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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2543272_2544423_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2543272 - 2544423

Intron Length:

1152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CTTCCCTGACCT

Flanking Amino Acid:

GRCLYDLILYRLHESPEEEP

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

70.4

35.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

85.2

0.79

0.7

84.8

Minor 5ss

26.8

-2.7

2.8

31.2

42.4

Minor BPS

58.9

0.36

1.8

78.42

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045720

2542964 - 2572254

29291