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Intron Name: Anas_platyrhynchos_platyrhynchos_2_25468444_25468971_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25468444 - 25468971

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTGGATAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

CTGTGTTGGATA

Flanking Amino Acid:

HANWNLTHAKTLQLDTLVDN

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

73.9

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

59.7

0.22

1.1

56.8

43.4

Minor 5ss

37.1

-1.5

3.3

50.2

46.4

Minor BPS

45.1

-0.3

1.9

53.67

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020484

25466901 - 25497882

30982

ENSAPLT00000015598

25467391 - 25492545

25155

ENSAPLT00000048309

25464785 - 25495692

30908

ENSAPLT00000027560

25464785 - 25479703

14919

ENSAPLT00000026925

25464785 - 25497989

33205