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Intron Name: Anas_platyrhynchos_platyrhynchos_2_25469054_25469707_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25469054 - 25469707

Intron Length:

654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

TTTCTTTTGAAG

Flanking Amino Acid:

ANGINISPDKKYIYVADILD

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

85.1

25.6

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

80.6

0.69

82.5

26.5

Minor 5ss

46.5

-0.4

2.7

61.9

36.7

Minor BPS

56.6

0.06

1.5

64.42

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020484

25466901 - 25497882

30982

ENSAPLT00000015598

25467391 - 25492545

25155

ENSAPLT00000048309

25464785 - 25495692

30908

ENSAPLT00000027560

25464785 - 25479703

14919

ENSAPLT00000026925

25464785 - 25497989

33205