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Intron Name: Anas_platyrhynchos_platyrhynchos_2_25472953_25476776_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25472953 - 25476776

Intron Length:

3824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

GTTGTTTTATCT

Flanking Amino Acid:

LPNCQLIKGIERGSEDIDIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

91.2

0.93

0.6

87.3

23.1

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

58.1

0.33

1.7

75.62

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014945

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026925

25464785 - 25497989

33205

ENSAPLT00000020484

25466901 - 25497882

30982

ENSAPLT00000015598

25467391 - 25492545

25155

ENSAPLT00000048309

25464785 - 25495692

30908

ENSAPLT00000027560

25464785 - 25479703

14919