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Intron Name: Anas_platyrhynchos_platyrhynchos_2_25527825_25528378_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25527825 - 25528378

Intron Length:

554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTTTTTACTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTTTACTT

Flanking Amino Acid:

KSPDDQKVLSDFIDTLIRVR

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.6

33.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

84.2

0.77

0.7

85.6

27.9

Minor 5ss

47.4

-0.3

2.8

63.8

41.6

Minor BPS

70.1

0.71

1.5

86.64

33.8

Associated Gene:

Gene:

PDK4

Ensembl Gene ID:

ENSAPLG00000015678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035216

25522192 - 25530274

8083

ENSAPLT00000016375

25521018 - 25530274

9257