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Intron Name: Anas_platyrhynchos_platyrhynchos_2_25577876_25579790_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
25577876 - 25579790

Intron Length:
1915

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAATATG

5'SS Class:
strong_major

3'SS Sequence:
TTTTTTAATTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTTTTAATT

Flanking Amino Acid:
RKEEERKKKEADLQQKKEPA

Intron Amino Acid Position:
37

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.1
0.9
0.9
84.2
33.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
87.1
0.83
0.8
86.5
31.5

Minor 5ss
38.7
-1.3
2.9
50.6
45.9

Minor BPS
84.9
1.17
0.8
94.97
24.6

Associated Gene:

Gene:
DYNC1I1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25562673 - 25725775
163103

25562673 - 25749427
186755

25577758 - 25743617
165860

25562673 - 25725775
163103