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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2558010_2562016_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2558010 - 2562016

Intron Length:

4007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCCA

5'SS Class:

strong_major

3'SS Sequence:

ACTGTTTTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATATAG

U12 Branch Point Sequence:

AACTGCTGTACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

67.6

39.4

Major BPS

-0

1.5

42.8

Major PPT

77.3

0.61

0.9

41.3

Minor 5ss

27.7

-2.6

2.9

32.8

42.1

Minor BPS

-0.2

2.2

64.28

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033505

2557878 - 2572254

14377