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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2558010_2562376_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2558010 - 2562376

Intron Length:

4367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCAACGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CTAATGTTAACA

Flanking Amino Acid:

SATVGPYKSQVNSKKQKMDT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

67.6

39.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

0.47

0.9

67.3

32.8

Minor 5ss

27.7

-2.6

2.9

32.8

42.1

Minor BPS

50.9

0.02

2.1

64.25

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019041

2552030 - 2572661

20632

ENSAPLT00000045720

2542964 - 2572254

29291