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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2564896_2565415_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2564896 - 2565415

Intron Length:

520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

AATTTTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTTGTTTAATT

Flanking Amino Acid:

EPNKAEPVTDWNSLSRLFPP

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

85.9

25.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

79.6

0.67

72.9

41.4

Minor 5ss

43.9

-0.7

2.8

43.6

Minor BPS

74.8

0.86

1.7

91.31

32.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045720

2542964 - 2572254

29291

ENSAPLT00000033505

2557878 - 2572254

14377

ENSAPLT00000019041

2552030 - 2572661

20632