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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2574319_2574463_F

Intron Information:

Intron Rank:

137318

Intron Class:

major

Intron Phase:

Intron Coordinates:

2574319 - 2574463

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTCCT

5'SS Class:

major

3'SS Sequence:

TTTTCCATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

AAACCAGTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

42.9

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

87.3

0.84

0.7

82.1

28.1

Minor 5ss

35.6

-1.6

3.2

47.6

42.2

Minor BPS

47.5

-0.1

2.2

67.86

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044194

2574205 - 2578192

3988