Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_25772515_25784807_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25772515 - 25784807

Intron Length:

12293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

TTTTTAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTATTTTTAATT

Flanking Amino Acid:

LAAEILAGGCAGGSQVIFTN

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

78.2

36.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.6

0.87

0.8

86.6

31.3

Minor 5ss

42.3

-0.9

2.8

55.7

41.6

Minor BPS

72.1

0.77

1.2

79.64

37.1

Associated Gene:

Gene:

SLC25A13

Ensembl Gene ID:

ENSAPLG00000015909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029764

25756253 - 25847389

91137

ENSAPLT00000016646

25756253 - 25846609

90357

ENSAPLT00000035241

25755521 - 25847389

91869