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Intron Name: Anas_platyrhynchos_platyrhynchos_2_25796291_25798080_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
25796291 - 25798080

Intron Length:
1790

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTGAGTAGC

5'SS Class:
major

3'SS Sequence:
GTCTCTACTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTTAC

U12 Branch Point Sequence:
TCTTCTTTTACT

Flanking Amino Acid:
TPFVEECLVAAAGGTTSHQV

Intron Amino Acid Position:
172

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.3
0.48
1.1
65.6
40.2

Major BPS
74.2
0.6
1
67
39.4

Major PPT
71.6
0.49
0.9
63.2
38.3

Minor 5ss
33.5
-1.9
2.8
46.7
41.7

Minor BPS
74.3
0.85
1.5
87.77
37.8

Associated Gene:

Gene:
SLC25A13

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25755521 - 25847389
91869

25756253 - 25846609
90357