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Intron Name: Anas_platyrhynchos_platyrhynchos_2_25908194_25909800_F

Intron Information:

Intron Rank:

139674

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25908194 - 25909800

Intron Length:

1607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TGAATGCTTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTTTCTTTGAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

86.9

30.1

Major BPS

74.6

0.61

1.4

34.5

Major PPT

58.5

0.19

1.2

56.8

43.3

Minor 5ss

39.9

-1.1

3.1

56.9

47.4

Minor BPS

0.96

1.3

92.24

29.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031462

25908096 - 25911034

2939

ENSAPLT00000029274

25908096 - 25914604

6509