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Intron Name: Anas_platyrhynchos_platyrhynchos_2_25910003_25914554_F

Intron Information:

Intron Rank:

139675

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

25910003 - 25914554

Intron Length:

4552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCTAA

5'SS Class:

major

3'SS Sequence:

TAAATGAGCAAAG|A

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.3

71.1

37.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

47.3

-0.1

1.2

41.4

41.6

Minor 5ss

38.6

-1.3

2.9

47.2

48.2

Minor BPS

79.5

1.2

92.62

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029274

25908096 - 25914604

6509