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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2618782_2621082_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2618782 - 2621082

Intron Length:

2301

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAT|GCAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

AAATATCAGTCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

AACTCCGGAAAT

Flanking Amino Acid:

FDLKVSGNLVIPSENLELVC

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

84.2

33.9

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

54.9

0.11

1.1

52.5

Minor 5ss

31.4

-2.1

3.9

41.7

Minor BPS

46.9

-0.1

2.2

66.02

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017812

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022415

2606045 - 2623611

17567