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Intron Name: Anas_platyrhynchos_platyrhynchos_2_26307517_26308491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26307517 - 26308491

Intron Length:

975

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGACA

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

GGGGCCTCACCC

Flanking Amino Acid:

MQSCSMGWAKDVEAAMRLPL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.3

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

71.7

0.49

0.8

62.2

34.7

Minor 5ss

31.2

-2.2

3.3

40.2

45.7

Minor BPS

45.6

-0.3

1.9

52.03

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043908

26307236 - 26311067

3832