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Intron Name: Anas_platyrhynchos_platyrhynchos_2_26309335_26310918_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26309335 - 26310918

Intron Length:

1584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

ATATATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TGTATTAAAACT

Flanking Amino Acid:

DAGYGQISHKRHKTDSFVGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

23.8

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

80.9

0.7

0.9

77.8

40.4

Minor 5ss

41.2

-1

2.8

49.4

41.3

Minor BPS

47.6

-0.1

1.9

69.79

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033345

26307752 - 26311067

3316

ENSAPLT00000021541

26307752 - 26313555

5804

ENSAPLT00000017000

26307752 - 26311067

3316

ENSAPLT00000043908

26307236 - 26311067

3832