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Intron Name: Anas_platyrhynchos_platyrhynchos_2_26310973_26313505_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26310973 - 26313505

Intron Length:

2533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TTTTTCTTTTTT

Flanking Amino Acid:

GLMGKRSLNSGSSERSIAQN

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

81.5

31.6

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

94.9

1.01

0.5

91.6

19.6

Minor 5ss

45.5

-0.5

2.5

56.3

43.3

Minor BPS

-0.2

3.6

83.03

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021541

26307752 - 26313555

5804