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Intron Name: Anas_platyrhynchos_platyrhynchos_2_26335810_26336076_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
26335810 - 26336076

Intron Length:
267

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATGTAAA

5'SS Class:
strong_major

3'SS Sequence:
GTTCTGAAAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTGAT

U12 Branch Point Sequence:
TTGTTCTGAAAA

Flanking Amino Acid:
SLPAEMRTPKNGIEKYLLRQ

Intron Amino Acid Position:
441

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.8
0.94
0.8
85
26.2

Major BPS
83.5
0.83
0.8
71.6
36.4

Major PPT
61.5
0.26
1.1
55.8
42.7

Minor 5ss
41.1
-1
2.5
50.4
46.1

Minor BPS
63.6
0.42
1.5
73.28
38.2

Associated Gene:

Gene:
ASNS

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26333969 - 26348681
14713