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Intron Name: Anas_platyrhynchos_platyrhynchos_2_26363878_26364408_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

26363878 - 26364408

Intron Length:

531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATGGGCA

5'SS Class:

major

3'SS Sequence:

TAACCCTTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

AGGACCCTAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

59.3

39.7

Major BPS

68.9

0.47

59.6

38.6

Major PPT

72.8

0.51

0.9

69.5

36.1

Minor 5ss

35.2

-1.7

3.4

38.5

46.7

Minor BPS

55.3

0.15

1.8

63.63

41.1

Associated Gene:

Gene:

C1GALT1

Ensembl Gene ID:

ENSAPLG00000029207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001417

26363705 - 26373375

9671