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Intron Name: Anas_platyrhynchos_platyrhynchos_2_26364607_26369228_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

26364607 - 26369228

Intron Length:

4622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTGGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTAGGCTTAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

77.5

32.9

Major BPS

100

1.24

0.5

100

Major PPT

73.9

0.54

1.1

72.2

42.7

Minor 5ss

29.2

-2.4

2.9

35.3

41.5

Minor BPS

61.1

0.34

1.9

71.78

40.8

Associated Gene:

Gene:

C1GALT1

Ensembl Gene ID:

ENSAPLG00000029207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047870

26363705 - 26377305

13601

ENSAPLT00000001417

26363705 - 26373375

9671