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Intron Name: Anas_platyrhynchos_platyrhynchos_2_26371753_26373165_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26371753 - 26373165

Intron Length:

1413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

ATTATTTTGACT

Flanking Amino Acid:

WNYNYYPAVEGPGCCSDLAV

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.9

81.8

38.5

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

0.7

0.8

78.8

34.4

Minor 5ss

43.8

-0.7

3.2

64.9

46.4

Minor BPS

68.3

0.66

1.2

81.39

33.8

Associated Gene:

Gene:

C1GALT1

Ensembl Gene ID:

ENSAPLG00000029207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047870

26363705 - 26377305

13601

ENSAPLT00000018502

26368664 - 26373375

4712

ENSAPLT00000017463

26364409 - 26377305

12897

ENSAPLT00000001417

26363705 - 26373375

9671