Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_26475754_26476859_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26475754 - 26476859

Intron Length:

1106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAG

U12 Branch Point Sequence:

TGCTTTTGCACA

Flanking Amino Acid:

NMGTPVSSCPGGSKSDEKVD

Intron Amino Acid Position:

803

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

73.4

37.3

Major BPS

58.8

0.22

1.6

Major PPT

75.6

0.58

0.9

71.4

38.4

Minor 5ss

39.7

-1.2

3.1

48.1

Minor BPS

47.5

-0.2

1.9

59.91

40.4

Associated Gene:

Gene:

MIOS

Ensembl Gene ID:

ENSAPLG00000002570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002597

26467476 - 26477320

9845

ENSAPLT00000022748

26467476 - 26477933

10458