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Intron Name: Anas_platyrhynchos_platyrhynchos_2_26485809_26485898_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26485809 - 26485898

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGGGGA

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCGGAG

U12 Branch Point Sequence:

GGTGTCGGAGCC

Flanking Amino Acid:

PVCFVGRLHKVHPSGKLFVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

1.3

56.7

42.5

Major BPS

-0.6

1.7

36.8

44.4

Major PPT

86.2

0.81

0.8

80.6

Minor 5ss

30.1

-2.3

3.3

38.5

46.5

Minor BPS

38.9

-0.8

2.2

48.24

41.4

Associated Gene:

Gene:

RPA3

Ensembl Gene ID:

ENSAPLG00000027160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046968

26483911 - 26486000

2090

ENSAPLT00000021543

26483561 - 26486000

2440