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Intron Name: Anas_platyrhynchos_platyrhynchos_2_26671868_26675737_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26671868 - 26675737

Intron Length:

3870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGAAAC

5'SS Class:

major

3'SS Sequence:

TGCTCTGAGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

TTATCTTTACTC

Flanking Amino Acid:

DLLDLQPEENASKDQFVRPL

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

69.5

34.7

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

61.1

0.25

1.1

57.1

42.6

Minor 5ss

-1.1

2.8

48.8

41.7

Minor BPS

66.9

0.51

1.5

74.68

36.5

Associated Gene:

Gene:

ICA1

Ensembl Gene ID:

ENSAPLG00000003010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003087

26663611 - 26725475

61865

ENSAPLT00000026527

26663611 - 26727047

63437