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Intron Name: Anas_platyrhynchos_platyrhynchos_2_26680631_26687029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26680631 - 26687029

Intron Length:

6399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

GATTATGATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTTATA

Flanking Amino Acid:

YQPYEFTMLKSLQDPVNKLT

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

87.7

27.9

Major BPS

100

1.24

0.5

100

Major PPT

0.25

1.1

51.7

46.7

Minor 5ss

33.9

-1.8

3.3

47.8

47.9

Minor BPS

64.8

0.46

1.9

80.63

34.6

Associated Gene:

Gene:

ICA1

Ensembl Gene ID:

ENSAPLG00000003010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026527

26663611 - 26727047

63437

ENSAPLT00000003087

26663611 - 26725475

61865