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Intron Name: Anas_platyrhynchos_platyrhynchos_2_26687129_26687308_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26687129 - 26687308

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCAAA

5'SS Class:

major

3'SS Sequence:

CTCTCCCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TTGCCTTGAAAT

Flanking Amino Acid:

LLSHVLTTYQTTLLHFWEKT

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

68.7

37.6

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

82.4

0.73

0.7

75.9

26.3

Minor 5ss

44.9

-0.6

2.6

57.3

Minor BPS

59.2

0.37

1.6

75.83

40.4

Associated Gene:

Gene:

ICA1

Ensembl Gene ID:

ENSAPLG00000003010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026527

26663611 - 26727047

63437

ENSAPLT00000003087

26663611 - 26725475

61865