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Intron Name: Anas_platyrhynchos_platyrhynchos_2_26687435_26714931_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26687435 - 26714931

Intron Length:

27497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATGT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

ACTACATAAACA

Flanking Amino Acid:

LYKQMEKFRKVQAQVRHAKL

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

74.2

37.1

Major BPS

0.1

59.7

32.6

Major PPT

73.6

0.53

74.3

34.2

Minor 5ss

45.8

-0.4

2.9

65.2

Minor BPS

49.7

-0

63.75

42.2

Associated Gene:

Gene:

ICA1

Ensembl Gene ID:

ENSAPLG00000003010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026527

26663611 - 26727047

63437

ENSAPLT00000003087

26663611 - 26725475

61865