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Intron Name: Anas_platyrhynchos_platyrhynchos_2_26715131_26717392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26715131 - 26717392

Intron Length:

2262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTTTTCTTCATT

Flanking Amino Acid:

GKALCFSSQQRLALRTPLSR

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

73.8

0.54

0.8

65.4

36.2

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

66.5

0.6

1.7

82.74

39.5

Associated Gene:

Gene:

ICA1

Ensembl Gene ID:

ENSAPLG00000003010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026527

26663611 - 26727047

63437

ENSAPLT00000003087

26663611 - 26725475

61865