Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_26721351_26725437_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26721351 - 26725437

Intron Length:

4087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

CTTAATATTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TCTTCCTTAATA

Flanking Amino Acid:

MEGHKYNYPREFYDQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

74.3

34.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

73.8

0.54

0.9

70.7

39.4

Minor 5ss

38.9

-1.3

2.7

34.4

Minor BPS

1.16

0.9

87.11

31.6

Associated Gene:

Gene:

ICA1

Ensembl Gene ID:

ENSAPLG00000003010

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026527

26663611 - 26727047

63437

ENSAPLT00000003087

26663611 - 26725475

61865