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Intron Name: Anas_platyrhynchos_platyrhynchos_2_27107700_27109117_F

Intron Information:

Intron Rank:

133599

Intron Class:

major

Intron Phase:

Intron Coordinates:

27107700 - 27109117

Intron Length:

1418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

CTTTGTTTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

83.1

28.4

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

68.3

0.41

71.4

33.4

Minor 5ss

34.5

-1.8

3.1

48.5

47.2

Minor BPS

68.7

0.57

1.8

77.59

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021698

27103859 - 27109127

5269

ENSAPLT00000047998

27100825 - 27109127

8303