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Intron Name: Anas_platyrhynchos_platyrhynchos_2_27107700_27109258_F

Intron Information:

Intron Rank:

133602

Intron Class:

major

Intron Phase:

Intron Coordinates:

27107700 - 27109258

Intron Length:

1559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCGCTTGGAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAA

U12 Branch Point Sequence:

GAGCCCTGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

83.1

28.4

Major BPS

57.2

0.18

1.1

48.9

36.6

Major PPT

60.9

0.25

1.7

69.1

Minor 5ss

34.5

-1.8

3.1

48.5

47.2

Minor BPS

50.9

0.02

1.6

57.89

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033577

27100825 - 27109262

8438